Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 CALR4P-201ENST00000431943 946 ntBASIC15.67■□□□□ 0.1
ATP2A3Q93084 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 AC091804.1-201ENST00000486888 567 ntBASIC15.67■□□□□ 0.1
ATP2A3Q93084 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 AC244157.2-201ENST00000616239 1006 ntBASIC15.67■□□□□ 0.1
ATP2A3Q93084 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 AL359258.3-201ENST00000622910 2331 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 AC005089.1-201ENST00000619486 2241 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 MIR663B-201ENST00000408361 115 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 POM121L10P-201ENST00000436994 1285 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 HSPB1P2-201ENST00000448722 546 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 RN7SL713P-201ENST00000582127 302 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 AC084346.2-201ENST00000607097 949 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 ZACNP1-201ENST00000612259 710 ntBASIC15.66■□□□□ 0.1
ATP2A3Q93084 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ATP2A3Q93084 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP2A3Q93084 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 AC023908.3-201ENST00000564211 3047 ntBASIC15.65■□□□□ 0.1
ATP2A3Q93084 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP2A3Q93084 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.65■□□□□ 0.1
ATP2A3Q93084 POM121L8P-201ENST00000417732 1281 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms