Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
DDX1Q92499 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.72■□□□□ 0.11
DDX1Q92499 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
DDX1Q92499 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
DDX1Q92499 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.72■□□□□ 0.11
DDX1Q92499 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.72■□□□□ 0.11
DDX1Q92499 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.72■□□□□ 0.11
DDX1Q92499 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.72■□□□□ 0.11
DDX1Q92499 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.72■□□□□ 0.11
DDX1Q92499 DUX4L45-201ENST00000566406 1057 ntBASIC15.72■□□□□ 0.11
DDX1Q92499 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
DDX1Q92499 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.72■□□□□ 0.11
DDX1Q92499 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DDX1Q92499 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DDX1Q92499 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.71■□□□□ 0.11
DDX1Q92499 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
DDX1Q92499 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
DDX1Q92499 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.71■□□□□ 0.11
DDX1Q92499 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.71■□□□□ 0.11
DDX1Q92499 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
DDX1Q92499 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
DDX1Q92499 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.71■□□□□ 0.11
DDX1Q92499 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.71■□□□□ 0.11
DDX1Q92499 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 FXNP2-201ENST00000411625 547 ntBASIC15.71■□□□□ 0.11
DDX1Q92499 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.71■□□□□ 0.11
DDX1Q92499 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
DDX1Q92499 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.71■□□□□ 0.11
DDX1Q92499 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.71■□□□□ 0.11
DDX1Q92499 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.71■□□□□ 0.11
DDX1Q92499 RN7SL713P-201ENST00000582127 302 ntBASIC15.71■□□□□ 0.11
DDX1Q92499 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
DDX1Q92499 AC138951.2-201ENST00000623455 1161 ntBASIC15.71■□□□□ 0.11
DDX1Q92499 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.71■□□□□ 0.11
DDX1Q92499 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.71■□□□□ 0.11
DDX1Q92499 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
DDX1Q92499 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DDX1Q92499 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 291 ms