Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF138Q8WVD3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
RNF138Q8WVD3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RNF138Q8WVD3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
RNF138Q8WVD3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF138Q8WVD3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.2□□□□□ -0.3
RNF138Q8WVD3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 MIR3188-201ENST00000583494 85 ntBASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AL805961.1-203ENST00000641078 1258 ntBASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AC012617.1-204ENST00000586340 2305 ntBASIC13.2□□□□□ -0.3
RNF138Q8WVD3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.2□□□□□ -0.3
RNF138Q8WVD3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF138Q8WVD3 AP002353.1-201ENST00000528257 1599 ntBASIC13.2□□□□□ -0.3
RNF138Q8WVD3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 TCAM1P-207ENST00000485295 1537 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 TUBB8P4-201ENST00000511806 1324 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 HSPA8P5-201ENST00000456928 2069 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC005089.1-201ENST00000619486 2241 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 CALR4P-201ENST00000431943 946 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC011742.3-201ENST00000439053 820 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AL596276.2-201ENST00000447525 331 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 EIF4HP1-201ENST00000453115 687 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 HIST2H2BC-201ENST00000498492 580 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 GPR182-203ENST00000622922 591 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC016397.2-201ENST00000624848 1985 ntBASIC13.19□□□□□ -0.3
RNF138Q8WVD3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms