Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 AL583810.1-201ENST00000553344 1045 ntBASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 AC126755.1-201ENST00000525846 6405 ntBASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 MIR600HG-201ENST00000449175 5984 ntBASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCC2Q8TAQ2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 AC012617.1-204ENST00000586340 2305 ntBASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 FAM8A4P-201ENST00000435433 1213 ntBASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 AL391280.1-201ENST00000506969 1062 ntBASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 BX088702.1-201ENST00000610784 235 ntBASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 RN7SL832P-201ENST00000607781 1756 ntBASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCC2Q8TAQ2 AC016397.2-201ENST00000624848 1985 ntBASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 AC215219.1-201ENST00000400706 1817 ntBASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCC2Q8TAQ2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms