Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 AL590440.2-201ENST00000641973 1595 ntBASIC15.88■□□□□ 0.13
BEST2Q8NFU1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 KLF2P1-201ENST00000447438 1042 ntBASIC15.88■□□□□ 0.13
BEST2Q8NFU1 AC044849.1-201ENST00000519737 1188 ntBASIC15.88■□□□□ 0.13
BEST2Q8NFU1 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 AC004923.1-202ENST00000642106 209 ntBASIC15.88■□□□□ 0.13
BEST2Q8NFU1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 AC139712.1-201ENST00000378256 1875 ntBASIC15.88■□□□□ 0.13
BEST2Q8NFU1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST2Q8NFU1 CICP14-201ENST00000629111 2732 ntBASIC15.88■□□□□ 0.13
BEST2Q8NFU1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 DPM3-202ENST00000368399 517 ntBASIC15.87■□□□□ 0.13
BEST2Q8NFU1 NKAIN1P1-201ENST00000435754 582 ntBASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AL157407.1-201ENST00000435784 904 ntBASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AC103988.2-201ENST00000561804 725 ntBASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AL136295.7-201ENST00000619226 1200 ntBASIC15.87■□□□□ 0.13
BEST2Q8NFU1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 Z98259.2-201ENST00000641583 609 ntBASIC15.87■□□□□ 0.13
BEST2Q8NFU1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST2Q8NFU1 AC015688.4-201ENST00000580780 1647 ntBASIC15.86■□□□□ 0.13
BEST2Q8NFU1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.86■□□□□ 0.13
BEST2Q8NFU1 EIF4HP1-201ENST00000453115 687 ntBASIC15.86■□□□□ 0.13
BEST2Q8NFU1 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.86■□□□□ 0.13
BEST2Q8NFU1 RPL18P13-201ENST00000478088 569 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms