Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 SPDYE17-201ENST00000412399 783 ntBASIC11.1□□□□□ -0.63
NUP35Q8NFH5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 AC135782.3-201ENST00000562782 2105 ntBASIC11.1□□□□□ -0.63
NUP35Q8NFH5 AC018845.2-201ENST00000568326 409 ntBASIC11.1□□□□□ -0.63
NUP35Q8NFH5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 AC148477.8-201ENST00000624298 468 ntBASIC11.1□□□□□ -0.63
NUP35Q8NFH5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NUP35Q8NFH5 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NUP35Q8NFH5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms