Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AL391280.1-201ENST00000506969 1062 ntBASIC13.88□□□□□ -0.19
NUP43Q8NFH3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AC233724.13-201ENST00000598383 410 ntBASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 MYADML-201ENST00000474610 2147 ntBASIC13.88□□□□□ -0.19
NUP43Q8NFH3 CU639417.3-201ENST00000624240 1404 ntBASIC13.88□□□□□ -0.19
NUP43Q8NFH3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 AC152010.1-201ENST00000415779 2006 ntBASIC13.88□□□□□ -0.19
NUP43Q8NFH3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP43Q8NFH3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 TMEM14DP-201ENST00000422205 345 ntBASIC13.87□□□□□ -0.19
NUP43Q8NFH3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 FTH1P14-201ENST00000482930 551 ntBASIC13.87□□□□□ -0.19
NUP43Q8NFH3 RNA5SP486-201ENST00000515961 83 ntBASIC13.87□□□□□ -0.19
NUP43Q8NFH3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 BTNL10-201ENST00000595971 695 ntBASIC13.87□□□□□ -0.19
NUP43Q8NFH3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NUP43Q8NFH3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AC016694.1-201ENST00000434179 700 ntBASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AC244107.1-201ENST00000442033 332 ntBASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms