Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AC009093.2-202ENST00000620513 2079 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 REXO1L5P-201ENST00000622260 2098 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AC107918.4-201ENST00000641966 3141 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AC126335.2-201ENST00000623362 4637 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 APRT-204ENST00000563655 709 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 BRF1-202ENST00000379932 884 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 PCDHB18P-202ENST00000526308 3197 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 DPM3-202ENST00000368399 517 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 APOA2-204ENST00000464492 530 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ADM-202ENST00000524948 584 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 RN7SL11P-201ENST00000471305 293 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AP001582.1-201ENST00000525856 295 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ACR-203ENST00000529621 708 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 KSR1-207ENST00000578981 748 ntTSL 4 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AP001505.2-201ENST00000616815 443 ntBASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CDK7-214ENST00000626796 358 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE1Q8NF91 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms