Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.02□□□□□ -0.16
SIMC1Q8NDZ2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 CLUHP2-201ENST00000426660 1303 ntBASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 PTENP1-202ENST00000532280 3996 ntBASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 AC025279.2-201ENST00000569730 653 ntBASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 AC015936.2-201ENST00000593177 259 ntBASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 ECM1P1-201ENST00000604092 1279 ntBASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SIMC1Q8NDZ2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 AL355864.2-201ENST00000447420 863 ntBASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms