Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC092135.3-201ENST00000624151 1846 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 TPM3P8-201ENST00000330554 643 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC025279.2-201ENST00000569730 653 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC138696.2-201ENST00000607376 223 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AL022328.1-201ENST00000610050 478 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC138466.3-201ENST00000619983 221 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 MRPL37P1-201ENST00000592451 1337 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC005252.3-201ENST00000623855 2258 ntBASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TTC9CQ8N5M4 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 RN7SKP230-201ENST00000365642 335 ntBASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 AL512384.1-201ENST00000406683 331 ntBASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 C2orf27AP3-201ENST00000434123 579 ntBASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 INE1-201ENST00000456273 945 ntBASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 AC106760.1-201ENST00000508690 800 ntBASIC11.74□□□□□ -0.53
TTC9CQ8N5M4 AC022447.6-201ENST00000515522 438 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms