Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AL355994.2-201ENST00000447882 704 ntBASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 RNA5SP412-201ENST00000516234 123 ntBASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AL583810.1-201ENST00000553344 1045 ntBASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AC010328.2-201ENST00000597698 1111 ntBASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AC006504.5-208ENST00000588784 2401 ntBASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 AGGF1P1-201ENST00000509500 2073 ntBASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 AC015688.4-201ENST00000580780 1647 ntBASIC15.58■□□□□ 0.09
SCUBE3Q8IX30 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 PUDPP3-201ENST00000445368 636 ntBASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 HIST2H2BB-201ENST00000449108 381 ntBASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 ALG3P1-201ENST00000508806 1114 ntBASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 AC006518.1-201ENST00000541449 943 ntBASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 AC009542.2-202ENST00000619004 1067 ntBASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 AC023908.3-201ENST00000564211 3047 ntBASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SCUBE3Q8IX30 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms