Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PFN2-212ENST00000490975 858 ntTSL 4 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 VENTXP3-201ENST00000546480 773 ntBASIC18.16■□□□□ 0.5
COL23A1Q86Y22 AL590235.1-201ENST00000564650 861 ntBASIC18.16■□□□□ 0.5
COL23A1Q86Y22 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 SNORD3B-1-201ENST00000577988 758 ntBASIC18.16■□□□□ 0.5
COL23A1Q86Y22 AC023024.2-201ENST00000623561 1993 ntBASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 LINC00528-201ENST00000600723 2160 ntBASIC18.15■□□□□ 0.5
COL23A1Q86Y22 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AC092570.1-201ENST00000414446 469 ntBASIC18.15■□□□□ 0.5
COL23A1Q86Y22 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 IGHEP2-201ENST00000519308 1256 ntBASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL23A1Q86Y22 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL23A1Q86Y22 KHSRPP1-201ENST00000427983 1768 ntBASIC18.14■□□□□ 0.5
COL23A1Q86Y22 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.14■□□□□ 0.5
COL23A1Q86Y22 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL23A1Q86Y22 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL23A1Q86Y22 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms