Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.35
LRRTM1Q86UE6 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.9□□□□□ -0.35
LRRTM1Q86UE6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LRRTM1Q86UE6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LRRTM1Q86UE6 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.9□□□□□ -0.35
LRRTM1Q86UE6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.9□□□□□ -0.35
LRRTM1Q86UE6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AL589987.1-201ENST00000453380 819 ntBASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC109322.1-201ENST00000524499 1264 ntBASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC027369.6-201ENST00000525520 931 ntBASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AL662799.1-202ENST00000614205 422 ntBASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC003102.2-201ENST00000589195 1469 ntBASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AL139385.1-201ENST00000611744 3272 ntBASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRTM1Q86UE6 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRTM1Q86UE6 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms