Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 PIFO-201ENST00000369737 746 ntTSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 AL157823.1-201ENST00000403727 628 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 RN7SL788P-201ENST00000460504 316 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 BCRP4-201ENST00000506079 804 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 AC113347.2-201ENST00000512350 279 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 KNOP1P1-201ENST00000542108 989 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 ANKRD26P1-203ENST00000569528 966 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 SNORD3B-1-201ENST00000577988 758 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 ODCP-201ENST00000459650 1639 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 PCDHA1-201ENST00000378133 2726 ntBASIC18.51■□□□□ 0.55
PTF1AQ7RTS3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 AC020658.6-201ENST00000623564 1870 ntBASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 AC092903.1-201ENST00000466506 262 ntBASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 DUT-207ENST00000559416 635 ntTSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 MED11-202ENST00000573708 802 ntTSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTF1AQ7RTS3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 SNX15-201ENST00000352068 771 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 OR7E115P-201ENST00000382617 1024 ntBASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 PPP1R2P4-201ENST00000424051 595 ntBASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 GRPEL2P1-201ENST00000453145 339 ntBASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.49■□□□□ 0.55
PTF1AQ7RTS3 AC025594.1-201ENST00000469533 543 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms