Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 IGHV3-71-201ENST00000523324 359 ntBASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 AL136301.1-201ENST00000615830 422 ntBASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 AC011498.7-201ENST00000624986 2027 ntBASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 AC126755.1-201ENST00000525846 6405 ntBASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 AL023775.1-201ENST00000454907 1746 ntBASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN20Q4JDL3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 MIR326-201ENST00000362220 95 ntBASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 COX11-210ENST00000639671 696 ntBASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 SHC1P1-201ENST00000425230 1745 ntBASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN20Q4JDL3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms