Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 AC008972.2-201ENST00000606587 494 ntBASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 AL365203.3-201ENST00000609742 2057 ntBASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 OLA1P2-201ENST00000395519 1264 ntBASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 AL035414.1-201ENST00000451327 857 ntBASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 AL160191.2-201ENST00000603975 601 ntBASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO4Q2I0M5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 AL360270.3-201ENST00000609118 1348 ntBASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 AC106827.1-201ENST00000366454 431 ntBASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 KRT18P36-201ENST00000411618 1276 ntBASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms