Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AL645939.5-201ENST00000606834 243 ntBASIC18.11■□□□□ 0.49
ATP2B3Q16720 AC090164.2-201ENST00000611487 516 ntBASIC18.11■□□□□ 0.49
ATP2B3Q16720 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 MBLAC2-202ENST00000514906 1936 ntBASIC18.11■□□□□ 0.49
ATP2B3Q16720 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 AL137784.3-201ENST00000623858 2288 ntBASIC18.11■□□□□ 0.49
ATP2B3Q16720 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 AC018529.2-202ENST00000611482 3087 ntBASIC18.1■□□□□ 0.49
ATP2B3Q16720 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 VDAC1P1-201ENST00000439229 848 ntBASIC18.1■□□□□ 0.49
ATP2B3Q16720 AL645933.1-201ENST00000440087 609 ntBASIC18.1■□□□□ 0.49
ATP2B3Q16720 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 AC008805.1-201ENST00000590892 364 ntBASIC18.1■□□□□ 0.49
ATP2B3Q16720 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2B3Q16720 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2B3Q16720 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.09■□□□□ 0.49
ATP2B3Q16720 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AC005089.1-201ENST00000619486 2241 ntBASIC18.09■□□□□ 0.49
ATP2B3Q16720 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AC009884.2-201ENST00000603110 324 ntBASIC18.09■□□□□ 0.49
ATP2B3Q16720 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AC015656.1-201ENST00000624209 3578 ntBASIC18.09■□□□□ 0.49
ATP2B3Q16720 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2B3Q16720 FLJ16779-201ENST00000612722 7638 ntBASIC18.09■□□□□ 0.49
ATP2B3Q16720 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATP2B3Q16720 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2B3Q16720 AL590440.2-201ENST00000641973 1595 ntBASIC18.08■□□□□ 0.49
ATP2B3Q16720 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2B3Q16720 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2B3Q16720 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2B3Q16720 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2B3Q16720 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.08■□□□□ 0.49
ATP2B3Q16720 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2B3Q16720 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms