Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP1Q04837 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 PCDHA5-203ENST00000614258 4248 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 AC131212.3-201ENST00000624087 4219 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.54□□□□□ -0.4
SSBP1Q04837 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SSBP1Q04837 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 AC005237.2-201ENST00000434368 219 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 MKNK2P1-201ENST00000437526 628 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 RPL13AP23-201ENST00000480739 586 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.54□□□□□ -0.4
SSBP1Q04837 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 SORD2P-201ENST00000558556 1069 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 FAM197Y3-203ENST00000618346 717 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 ZNF259P1-201ENST00000407656 1365 ntBASIC12.54□□□□□ -0.4
SSBP1Q04837 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP1Q04837 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP1Q04837 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP1Q04837 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 AP002761.4-201ENST00000565433 3361 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.53□□□□□ -0.4
SSBP1Q04837 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.53□□□□□ -0.4
SSBP1Q04837 KRT18P3-201ENST00000451602 1288 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 SDHAP3-202ENST00000515467 728 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
SSBP1Q04837 AC040169.1-201ENST00000565382 521 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SSBP1Q04837 SLC25A6P4-201ENST00000586535 553 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 AC027601.4-201ENST00000611259 610 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP1Q04837 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SSBP1Q04837 PRSS30P-206ENST00000641773 873 ntBASIC12.53□□□□□ -0.4
SSBP1Q04837 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP1Q04837 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP1Q04837 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms