Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.16□□□□□ -0.46
SPCS3P61009 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
SPCS3P61009 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SPCS3P61009 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SPCS3P61009 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS3P61009 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.16□□□□□ -0.46
SPCS3P61009 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.15□□□□□ -0.46
SPCS3P61009 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SPCS3P61009 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.15□□□□□ -0.46
SPCS3P61009 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.15□□□□□ -0.46
SPCS3P61009 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 AL645937.2-201ENST00000396808 931 ntBASIC12.15□□□□□ -0.46
SPCS3P61009 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.15□□□□□ -0.46
SPCS3P61009 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SPCS3P61009 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.15□□□□□ -0.46
SPCS3P61009 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.15□□□□□ -0.46
SPCS3P61009 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
SPCS3P61009 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.15□□□□□ -0.46
SPCS3P61009 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 AL157414.3-201ENST00000624276 1954 ntBASIC12.15□□□□□ -0.46
SPCS3P61009 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SPCS3P61009 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SPCS3P61009 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS3P61009 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.15□□□□□ -0.46
SPCS3P61009 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
SPCS3P61009 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SPCS3P61009 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.15□□□□□ -0.47
SPCS3P61009 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SPCS3P61009 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
SPCS3P61009 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
SPCS3P61009 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 AL357140.3-201ENST00000639753 1983 ntBASIC12.14□□□□□ -0.47
SPCS3P61009 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms