Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 GOLGA2P4-201ENST00000441462 777 ntBASIC14.22□□□□□ -0.13
VSX2P58304 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.22□□□□□ -0.13
VSX2P58304 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.22□□□□□ -0.13
VSX2P58304 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.22□□□□□ -0.13
VSX2P58304 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.22□□□□□ -0.13
VSX2P58304 MIR4538-201ENST00000581377 78 ntBASIC14.22□□□□□ -0.13
VSX2P58304 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.22□□□□□ -0.13
VSX2P58304 AL136301.1-201ENST00000615830 422 ntBASIC14.22□□□□□ -0.13
VSX2P58304 AC244157.2-201ENST00000616239 1006 ntBASIC14.22□□□□□ -0.13
VSX2P58304 MIR6799-201ENST00000620297 69 ntBASIC14.22□□□□□ -0.13
VSX2P58304 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VSX2P58304 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.22□□□□□ -0.13
VSX2P58304 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
VSX2P58304 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.22□□□□□ -0.13
VSX2P58304 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VSX2P58304 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VSX2P58304 AC106881.1-201ENST00000605849 3329 ntBASIC14.21□□□□□ -0.13
VSX2P58304 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
VSX2P58304 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VSX2P58304 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 RPSAP36-202ENST00000494591 1261 ntBASIC14.21□□□□□ -0.13
VSX2P58304 AC100850.1-201ENST00000506768 649 ntBASIC14.21□□□□□ -0.13
VSX2P58304 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.21□□□□□ -0.13
VSX2P58304 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 AL358472.3-201ENST00000608147 415 ntBASIC14.21□□□□□ -0.13
VSX2P58304 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 AP001002.3-201ENST00000623482 206 ntBASIC14.21□□□□□ -0.13
VSX2P58304 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.21□□□□□ -0.13
VSX2P58304 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VSX2P58304 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VSX2P58304 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
VSX2P58304 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VSX2P58304 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
VSX2P58304 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VSX2P58304 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.21□□□□□ -0.14
VSX2P58304 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VSX2P58304 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VSX2P58304 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
VSX2P58304 AC018529.2-202ENST00000611482 3087 ntBASIC14.21□□□□□ -0.14
VSX2P58304 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 AC018442.1-201ENST00000421439 2061 ntBASIC14.2□□□□□ -0.14
VSX2P58304 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VSX2P58304 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.2□□□□□ -0.14
VSX2P58304 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.2□□□□□ -0.14
VSX2P58304 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 PFN1P12-201ENST00000455938 534 ntBASIC14.2□□□□□ -0.14
VSX2P58304 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms