Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CAV3P56539 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.31□□□□□ -0.28
CAV3P56539 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CAV3P56539 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.31□□□□□ -0.28
CAV3P56539 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.31□□□□□ -0.28
CAV3P56539 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.31□□□□□ -0.28
CAV3P56539 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CAV3P56539 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.31□□□□□ -0.28
CAV3P56539 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CAV3P56539 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CAV3P56539 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.3□□□□□ -0.28
CAV3P56539 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.3□□□□□ -0.28
CAV3P56539 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.3□□□□□ -0.28
CAV3P56539 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.3□□□□□ -0.28
CAV3P56539 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.3□□□□□ -0.28
CAV3P56539 SERBP1P3-201ENST00000459980 809 ntBASIC13.3□□□□□ -0.28
CAV3P56539 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.3□□□□□ -0.28
CAV3P56539 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
CAV3P56539 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.3□□□□□ -0.28
CAV3P56539 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 RFPL4AP1-201ENST00000530883 850 ntBASIC13.3□□□□□ -0.28
CAV3P56539 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.3□□□□□ -0.28
CAV3P56539 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CAV3P56539 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.3□□□□□ -0.28
CAV3P56539 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.3□□□□□ -0.28
CAV3P56539 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 KRT8P22-201ENST00000562317 1415 ntBASIC13.3□□□□□ -0.28
CAV3P56539 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.3□□□□□ -0.28
CAV3P56539 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CAV3P56539 AC023794.5-201ENST00000564380 2157 ntBASIC13.3□□□□□ -0.28
CAV3P56539 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.29□□□□□ -0.28
CAV3P56539 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.29□□□□□ -0.28
CAV3P56539 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.29□□□□□ -0.28
CAV3P56539 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.29□□□□□ -0.28
CAV3P56539 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CAV3P56539 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CAV3P56539 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CAV3P56539 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 AL365181.3-201ENST00000605886 3222 ntBASIC13.29□□□□□ -0.28
CAV3P56539 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
CAV3P56539 AGGF1P1-201ENST00000509500 2073 ntBASIC13.29□□□□□ -0.28
CAV3P56539 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CAV3P56539 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CAV3P56539 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms