Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.37□□□□□ -0.27
SUMO3P55854 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 AL354877.1-201ENST00000424412 413 ntBASIC13.37□□□□□ -0.27
SUMO3P55854 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.37□□□□□ -0.27
SUMO3P55854 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.37□□□□□ -0.27
SUMO3P55854 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.37□□□□□ -0.27
SUMO3P55854 Z93015.1-201ENST00000451718 390 ntBASIC13.37□□□□□ -0.27
SUMO3P55854 AC100850.1-201ENST00000506768 649 ntBASIC13.37□□□□□ -0.27
SUMO3P55854 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.37□□□□□ -0.27
SUMO3P55854 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.37□□□□□ -0.27
SUMO3P55854 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.37□□□□□ -0.27
SUMO3P55854 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.37□□□□□ -0.27
SUMO3P55854 AC009955.4-201ENST00000597192 544 ntBASIC13.37□□□□□ -0.27
SUMO3P55854 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SUMO3P55854 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.37□□□□□ -0.27
SUMO3P55854 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SUMO3P55854 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SUMO3P55854 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.37□□□□□ -0.27
SUMO3P55854 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.37□□□□□ -0.27
SUMO3P55854 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SUMO3P55854 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
SUMO3P55854 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SUMO3P55854 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.37□□□□□ -0.27
SUMO3P55854 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.37□□□□□ -0.27
SUMO3P55854 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.36□□□□□ -0.27
SUMO3P55854 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.36□□□□□ -0.27
SUMO3P55854 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 MIR4741-201ENST00000579822 90 ntBASIC13.36□□□□□ -0.27
SUMO3P55854 MIR4259-201ENST00000584466 101 ntBASIC13.36□□□□□ -0.27
SUMO3P55854 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.36□□□□□ -0.27
SUMO3P55854 AL359881.2-201ENST00000602973 570 ntBASIC13.36□□□□□ -0.27
SUMO3P55854 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
SUMO3P55854 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 AC215219.1-201ENST00000400706 1817 ntBASIC13.36□□□□□ -0.27
SUMO3P55854 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SUMO3P55854 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SUMO3P55854 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SUMO3P55854 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SUMO3P55854 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SUMO3P55854 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SUMO3P55854 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.35□□□□□ -0.27
SUMO3P55854 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.35□□□□□ -0.27
SUMO3P55854 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SUMO3P55854 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SUMO3P55854 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SUMO3P55854 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SUMO3P55854 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SUMO3P55854 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SUMO3P55854 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SUMO3P55854 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms