Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDH11P55287 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH11P55287 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH11P55287 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH11P55287 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH11P55287 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CDH11P55287 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH11P55287 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH11P55287 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH11P55287 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH11P55287 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH11P55287 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH11P55287 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH11P55287 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.66□□□□□ -0.22
CDH11P55287 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 AL360270.3-201ENST00000609118 1348 ntBASIC13.65□□□□□ -0.22
CDH11P55287 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 AC079781.5-202ENST00000641784 3743 ntBASIC13.65□□□□□ -0.22
CDH11P55287 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CDH11P55287 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CDH11P55287 AC131212.3-201ENST00000624087 4219 ntBASIC13.65□□□□□ -0.22
CDH11P55287 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH11P55287 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDH11P55287 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CDH11P55287 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 TOMM22P5-201ENST00000416399 439 ntBASIC13.65□□□□□ -0.22
CDH11P55287 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.65□□□□□ -0.22
CDH11P55287 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH11P55287 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.65□□□□□ -0.22
CDH11P55287 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.65□□□□□ -0.22
CDH11P55287 AC132938.2-201ENST00000579188 680 ntBASIC13.65□□□□□ -0.22
CDH11P55287 CTBP2P3-201ENST00000585629 1255 ntBASIC13.65□□□□□ -0.22
CDH11P55287 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDH11P55287 AL591163.1-201ENST00000641757 987 ntBASIC13.65□□□□□ -0.22
CDH11P55287 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDH11P55287 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 AL031595.1-201ENST00000623969 4709 ntBASIC13.65□□□□□ -0.22
CDH11P55287 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 AL354702.1-201ENST00000442006 1960 ntBASIC13.65□□□□□ -0.22
CDH11P55287 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH11P55287 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH11P55287 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH11P55287 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CDH11P55287 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.64□□□□□ -0.23
CDH11P55287 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.64□□□□□ -0.23
CDH11P55287 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.64□□□□□ -0.23
CDH11P55287 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.64□□□□□ -0.23
CDH11P55287 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.64□□□□□ -0.23
CDH11P55287 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CDH11P55287 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.64□□□□□ -0.23
CDH11P55287 AC098850.1-201ENST00000419919 790 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms