Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN5P54829 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.33■□□□□ 0.04
PTPN5P54829 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.33■□□□□ 0.04
PTPN5P54829 AC138894.2-201ENST00000602838 371 ntBASIC15.33■□□□□ 0.04
PTPN5P54829 AC007881.3-201ENST00000608897 607 ntBASIC15.33■□□□□ 0.04
PTPN5P54829 AL161773.1-201ENST00000624845 863 ntBASIC15.33■□□□□ 0.04
PTPN5P54829 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN5P54829 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN5P54829 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 SEPT7P7-201ENST00000420492 1301 ntBASIC15.33■□□□□ 0.04
PTPN5P54829 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN5P54829 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN5P54829 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN5P54829 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN5P54829 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN5P54829 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN5P54829 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 CICP11-201ENST00000434745 2827 ntBASIC15.32■□□□□ 0.04
PTPN5P54829 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN5P54829 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
PTPN5P54829 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN5P54829 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN5P54829 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 BCAS2P2-201ENST00000425064 674 ntBASIC15.32■□□□□ 0.04
PTPN5P54829 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.32■□□□□ 0.04
PTPN5P54829 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN5P54829 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN5P54829 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN5P54829 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN5P54829 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN5P54829 AL118516.1-201ENST00000564152 670 ntBASIC15.32■□□□□ 0.04
PTPN5P54829 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN5P54829 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN5P54829 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN5P54829 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 AL353729.2-201ENST00000605859 1249 ntBASIC15.32■□□□□ 0.04
PTPN5P54829 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN5P54829 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PTPN5P54829 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN5P54829 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN5P54829 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN5P54829 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTPN5P54829 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN5P54829 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN5P54829 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN5P54829 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN5P54829 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN5P54829 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTPN5P54829 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN5P54829 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN5P54829 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN5P54829 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN5P54829 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN5P54829 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN5P54829 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN5P54829 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN5P54829 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN5P54829 AL136309.1-201ENST00000403917 691 ntBASIC15.31■□□□□ 0.04
PTPN5P54829 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN5P54829 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN5P54829 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN5P54829 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN5P54829 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN5P54829 AC024293.1-201ENST00000467930 498 ntBASIC15.31■□□□□ 0.04
PTPN5P54829 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN5P54829 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN5P54829 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms