Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 AL008718.2-201ENST00000609206 1313 ntBASIC16.3■□□□□ 0.2
GPC3P51654 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.3■□□□□ 0.2
GPC3P51654 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
GPC3P51654 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.3■□□□□ 0.2
GPC3P51654 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
GPC3P51654 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.3■□□□□ 0.2
GPC3P51654 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.3■□□□□ 0.2
GPC3P51654 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
GPC3P51654 AC090164.2-201ENST00000611487 516 ntBASIC16.3■□□□□ 0.2
GPC3P51654 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 Z98259.2-201ENST00000641583 609 ntBASIC16.3■□□□□ 0.2
GPC3P51654 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC3P51654 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 FAM45BP-202ENST00000592932 1624 ntBASIC16.3■□□□□ 0.2
GPC3P51654 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC3P51654 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC3P51654 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC3P51654 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GPC3P51654 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC3P51654 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 AL008707.1-201ENST00000422498 534 ntBASIC16.29■□□□□ 0.2
GPC3P51654 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 VDAC1P1-201ENST00000439229 848 ntBASIC16.29■□□□□ 0.2
GPC3P51654 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.29■□□□□ 0.2
GPC3P51654 AC012441.2-201ENST00000444843 739 ntBASIC16.29■□□□□ 0.2
GPC3P51654 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC3P51654 MARK2P5-201ENST00000507649 634 ntBASIC16.29■□□□□ 0.2
GPC3P51654 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.29■□□□□ 0.2
GPC3P51654 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC3P51654 RN7SL774P-201ENST00000577467 290 ntBASIC16.29■□□□□ 0.2
GPC3P51654 MIR3619-201ENST00000579667 83 ntBASIC16.29■□□□□ 0.2
GPC3P51654 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.29■□□□□ 0.2
GPC3P51654 AC026740.1-201ENST00000607068 791 ntBASIC16.29■□□□□ 0.2
GPC3P51654 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.29■□□□□ 0.2
GPC3P51654 AC027601.3-201ENST00000622907 509 ntBASIC16.29■□□□□ 0.2
GPC3P51654 AC138627.1-207ENST00000641560 1006 ntBASIC16.29■□□□□ 0.2
GPC3P51654 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GPC3P51654 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GPC3P51654 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GPC3P51654 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.29■□□□□ 0.2
GPC3P51654 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GPC3P51654 AC232323.1-201ENST00000540724 2099 ntBASIC16.28■□□□□ 0.2
GPC3P51654 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GPC3P51654 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.28■□□□□ 0.2
GPC3P51654 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GPC3P51654 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 MIR769-201ENST00000390225 118 ntBASIC16.28■□□□□ 0.2
GPC3P51654 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 812.4 ms