Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.38□□□□□ -0.11
ERFP50548 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 AC018665.1-201ENST00000622927 1362 ntBASIC14.38□□□□□ -0.11
ERFP50548 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 AC002056.1-201ENST00000395613 760 ntBASIC14.38□□□□□ -0.11
ERFP50548 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 KRT18P3-201ENST00000451602 1288 ntBASIC14.38□□□□□ -0.11
ERFP50548 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.38□□□□□ -0.11
ERFP50548 TMEM198B-204ENST00000484016 896 ntBASIC14.38□□□□□ -0.11
ERFP50548 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 AC015910.1-201ENST00000579400 975 ntBASIC14.38□□□□□ -0.11
ERFP50548 AC027601.4-201ENST00000611259 610 ntBASIC14.38□□□□□ -0.11
ERFP50548 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.38□□□□□ -0.11
ERFP50548 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC14.38□□□□□ -0.11
ERFP50548 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERFP50548 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ERFP50548 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
ERFP50548 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 AC015818.8-201ENST00000587907 1519 ntBASIC14.37□□□□□ -0.11
ERFP50548 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ERFP50548 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 HIST3H2BA-201ENST00000436555 524 ntBASIC14.37□□□□□ -0.11
ERFP50548 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.37□□□□□ -0.11
ERFP50548 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.37□□□□□ -0.11
ERFP50548 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
ERFP50548 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERFP50548 TNRC18P1-201ENST00000502875 3650 ntBASIC14.37□□□□□ -0.11
ERFP50548 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.37□□□□□ -0.11
ERFP50548 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms