Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDX1P47902 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDX1P47902 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDX1P47902 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDX1P47902 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.21□□□□□ -0.45
CDX1P47902 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.21□□□□□ -0.45
CDX1P47902 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDX1P47902 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.21□□□□□ -0.45
CDX1P47902 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CDX1P47902 KRT17P7-201ENST00000451704 1104 ntBASIC12.21□□□□□ -0.45
CDX1P47902 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.21□□□□□ -0.45
CDX1P47902 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 AL391069.4-201ENST00000609583 481 ntBASIC12.21□□□□□ -0.45
CDX1P47902 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.21□□□□□ -0.45
CDX1P47902 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.21□□□□□ -0.45
CDX1P47902 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.21□□□□□ -0.45
CDX1P47902 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDX1P47902 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.21□□□□□ -0.46
CDX1P47902 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CDX1P47902 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CDX1P47902 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CDX1P47902 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CDX1P47902 AC126365.1-201ENST00000578585 1514 ntBASIC12.21□□□□□ -0.46
CDX1P47902 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CDX1P47902 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CDX1P47902 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.21□□□□□ -0.46
CDX1P47902 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CDX1P47902 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDX1P47902 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.21□□□□□ -0.46
CDX1P47902 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 BEND3P3-201ENST00000611030 2440 ntBASIC12.2□□□□□ -0.46
CDX1P47902 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 KRT8P44-201ENST00000441609 1350 ntBASIC12.2□□□□□ -0.46
CDX1P47902 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CDX1P47902 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.2□□□□□ -0.46
CDX1P47902 RN7SL752P-201ENST00000463779 287 ntBASIC12.2□□□□□ -0.46
CDX1P47902 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.2□□□□□ -0.46
CDX1P47902 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.2□□□□□ -0.46
CDX1P47902 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 AL158212.4-201ENST00000624062 1286 ntBASIC12.2□□□□□ -0.46
CDX1P47902 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CDX1P47902 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDX1P47902 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CDX1P47902 AL607033.1-201ENST00000623900 1599 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms