Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.68□□□□□ -0.22
SLC1A3P43003 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SLC1A3P43003 TDH-203ENST00000531764 1110 ntBASIC13.68□□□□□ -0.22
SLC1A3P43003 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A3P43003 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.68□□□□□ -0.22
SLC1A3P43003 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
SLC1A3P43003 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A3P43003 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A3P43003 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 AC011474.4-201ENST00000623523 2076 ntBASIC13.68□□□□□ -0.22
SLC1A3P43003 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SLC1A3P43003 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SLC1A3P43003 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A3P43003 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SLC1A3P43003 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 AL137784.3-201ENST00000623858 2288 ntBASIC13.67□□□□□ -0.22
SLC1A3P43003 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 MSTO2P-201ENST00000314835 1709 ntBASIC13.67□□□□□ -0.22
SLC1A3P43003 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SLC1A3P43003 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC1A3P43003 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SLC1A3P43003 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 AC079781.5-202ENST00000641784 3743 ntBASIC13.67□□□□□ -0.22
SLC1A3P43003 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SLC1A3P43003 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A3P43003 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A3P43003 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 AC068587.3-201ENST00000526613 355 ntBASIC13.67□□□□□ -0.22
SLC1A3P43003 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.67□□□□□ -0.22
SLC1A3P43003 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.67□□□□□ -0.22
SLC1A3P43003 MIR5189-201ENST00000577370 114 ntBASIC13.67□□□□□ -0.22
SLC1A3P43003 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SLC1A3P43003 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 RPSAP52-203ENST00000622976 1023 ntBASIC13.67□□□□□ -0.22
SLC1A3P43003 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC1A3P43003 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC1A3P43003 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC1A3P43003 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC1A3P43003 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SLC1A3P43003 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A3P43003 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A3P43003 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A3P43003 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A3P43003 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A3P43003 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
SLC1A3P43003 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A3P43003 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms