Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RFC5P40937 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.3■□□□□ 0.2
RFC5P40937 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.3■□□□□ 0.2
RFC5P40937 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 AC016700.1-201ENST00000429424 312 ntBASIC16.3■□□□□ 0.2
RFC5P40937 VDAC1P1-201ENST00000439229 848 ntBASIC16.3■□□□□ 0.2
RFC5P40937 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.3■□□□□ 0.2
RFC5P40937 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RFC5P40937 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.3■□□□□ 0.2
RFC5P40937 AC005962.1-201ENST00000584100 773 ntBASIC16.3■□□□□ 0.2
RFC5P40937 AC008805.1-201ENST00000590892 364 ntBASIC16.3■□□□□ 0.2
RFC5P40937 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 AC090164.2-201ENST00000611487 516 ntBASIC16.3■□□□□ 0.2
RFC5P40937 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.3■□□□□ 0.2
RFC5P40937 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RFC5P40937 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.3■□□□□ 0.2
RFC5P40937 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC5P40937 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFC5P40937 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RFC5P40937 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFC5P40937 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.29■□□□□ 0.2
RFC5P40937 HLA-J-204ENST00000495278 958 ntBASIC16.29■□□□□ 0.2
RFC5P40937 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.29■□□□□ 0.2
RFC5P40937 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 AL160314.3-201ENST00000556041 767 ntBASIC16.29■□□□□ 0.2
RFC5P40937 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.29■□□□□ 0.2
RFC5P40937 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RFC5P40937 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC5P40937 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFC5P40937 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFC5P40937 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC5P40937 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC5P40937 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC5P40937 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
RFC5P40937 KHSRPP1-201ENST00000427983 1768 ntBASIC16.28■□□□□ 0.2
RFC5P40937 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC5P40937 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.28■□□□□ 0.2
RFC5P40937 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC5P40937 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC5P40937 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms