Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.86■□□□□ 0.29
COPB2P35606 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
COPB2P35606 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 AC006486.2-201ENST00000624246 2199 ntBASIC16.85■□□□□ 0.29
COPB2P35606 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.85■□□□□ 0.29
COPB2P35606 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.85■□□□□ 0.29
COPB2P35606 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.85■□□□□ 0.29
COPB2P35606 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 AC253536.4-201ENST00000440539 267 ntBASIC16.85■□□□□ 0.29
COPB2P35606 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.85■□□□□ 0.29
COPB2P35606 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.85■□□□□ 0.29
COPB2P35606 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 AC008723.1-201ENST00000506922 207 ntBASIC16.85■□□□□ 0.29
COPB2P35606 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
COPB2P35606 AC051619.9-201ENST00000623237 597 ntBASIC16.85■□□□□ 0.29
COPB2P35606 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.85■□□□□ 0.29
COPB2P35606 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.85■□□□□ 0.29
COPB2P35606 AC009093.10-201ENST00000641956 1442 ntBASIC16.85■□□□□ 0.29
COPB2P35606 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
COPB2P35606 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COPB2P35606 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COPB2P35606 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPB2P35606 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.84■□□□□ 0.29
COPB2P35606 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.84■□□□□ 0.29
COPB2P35606 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COPB2P35606 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.84■□□□□ 0.29
COPB2P35606 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.84■□□□□ 0.29
COPB2P35606 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
COPB2P35606 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.84■□□□□ 0.29
COPB2P35606 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.84■□□□□ 0.29
COPB2P35606 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 AC008267.1-201ENST00000474858 1069 ntBASIC16.84■□□□□ 0.29
COPB2P35606 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.84■□□□□ 0.29
COPB2P35606 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.84■□□□□ 0.29
COPB2P35606 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.84■□□□□ 0.29
COPB2P35606 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.84■□□□□ 0.29
COPB2P35606 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.84■□□□□ 0.29
COPB2P35606 MIR6727-201ENST00000620702 65 ntBASIC16.84■□□□□ 0.29
COPB2P35606 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.84■□□□□ 0.29
COPB2P35606 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COPB2P35606 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 CYP4F23P-201ENST00000593402 1579 ntBASIC16.84■□□□□ 0.29
COPB2P35606 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COPB2P35606 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COPB2P35606 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPB2P35606 AL109954.1-202ENST00000564051 2148 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms