Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.52■□□□□ 0.72
USP6P35125 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
USP6P35125 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP6P35125 SCARNA12-201ENST00000459155 270 ntBASIC19.52■□□□□ 0.72
USP6P35125 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC19.52■□□□□ 0.72
USP6P35125 RN7SL564P-201ENST00000496309 250 ntBASIC19.52■□□□□ 0.72
USP6P35125 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC19.52■□□□□ 0.72
USP6P35125 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.52■□□□□ 0.72
USP6P35125 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.52■□□□□ 0.72
USP6P35125 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
USP6P35125 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.52■□□□□ 0.72
USP6P35125 AC023157.3-201ENST00000619086 2088 ntBASIC19.52■□□□□ 0.72
USP6P35125 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
USP6P35125 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP6P35125 AC025183.3-201ENST00000623526 1482 ntBASIC19.52■□□□□ 0.72
USP6P35125 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.52■□□□□ 0.72
USP6P35125 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP6P35125 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.52■□□□□ 0.72
USP6P35125 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.52■□□□□ 0.72
USP6P35125 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP6P35125 HYMAI-201ENST00000635591 3347 ntBASIC19.52■□□□□ 0.72
USP6P35125 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP6P35125 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.52■□□□□ 0.71
USP6P35125 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
USP6P35125 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP6P35125 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP6P35125 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
USP6P35125 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP6P35125 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP6P35125 RNVU1-8-201ENST00000364272 125 ntBASIC19.51■□□□□ 0.71
USP6P35125 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP6P35125 AC084752.1-201ENST00000509766 622 ntBASIC19.51■□□□□ 0.71
USP6P35125 IGHV1-12-201ENST00000518307 205 ntBASIC19.51■□□□□ 0.71
USP6P35125 KLF17P1-201ENST00000547105 1126 ntBASIC19.51■□□□□ 0.71
USP6P35125 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.51■□□□□ 0.71
USP6P35125 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.51■□□□□ 0.71
USP6P35125 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.51■□□□□ 0.71
USP6P35125 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.51■□□□□ 0.71
USP6P35125 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.51■□□□□ 0.71
USP6P35125 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP6P35125 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.51■□□□□ 0.71
USP6P35125 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP6P35125 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.51■□□□□ 0.71
USP6P35125 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP6P35125 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.51■□□□□ 0.71
USP6P35125 RN7SL396P-201ENST00000471086 295 ntBASIC19.51■□□□□ 0.71
USP6P35125 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC19.51■□□□□ 0.71
USP6P35125 AC005357.2-202ENST00000590507 1060 ntBASIC19.51■□□□□ 0.71
USP6P35125 AL021707.6-201ENST00000609212 491 ntBASIC19.51■□□□□ 0.71
USP6P35125 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP6P35125 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
USP6P35125 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6P35125 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.5■□□□□ 0.71
USP6P35125 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6P35125 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.5■□□□□ 0.71
USP6P35125 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms