Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.26■□□□□ 0.19
CTGFP29279 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.26■□□□□ 0.19
CTGFP29279 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTGFP29279 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.26■□□□□ 0.19
CTGFP29279 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.26■□□□□ 0.19
CTGFP29279 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTGFP29279 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.26■□□□□ 0.19
CTGFP29279 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTGFP29279 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CTGFP29279 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTGFP29279 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTGFP29279 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTGFP29279 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTGFP29279 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.25■□□□□ 0.19
CTGFP29279 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.25■□□□□ 0.19
CTGFP29279 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CTGFP29279 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 LAP3P2-201ENST00000454686 1454 ntBASIC16.25■□□□□ 0.19
CTGFP29279 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.25■□□□□ 0.19
CTGFP29279 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CTGFP29279 OR10N1P-201ENST00000392758 869 ntBASIC16.25■□□□□ 0.19
CTGFP29279 AF274858.1-201ENST00000406288 372 ntBASIC16.25■□□□□ 0.19
CTGFP29279 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.25■□□□□ 0.19
CTGFP29279 AL451000.1-201ENST00000451300 1186 ntBASIC16.25■□□□□ 0.19
CTGFP29279 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.25■□□□□ 0.19
CTGFP29279 GRPEL2P1-201ENST00000453145 339 ntBASIC16.25■□□□□ 0.19
CTGFP29279 EEF1GP8-201ENST00000506566 1154 ntBASIC16.25■□□□□ 0.19
CTGFP29279 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.25■□□□□ 0.19
CTGFP29279 IGHEP2-201ENST00000519308 1256 ntBASIC16.25■□□□□ 0.19
CTGFP29279 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
CTGFP29279 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.25■□□□□ 0.19
CTGFP29279 RN7SL121P-201ENST00000584223 273 ntBASIC16.25■□□□□ 0.19
CTGFP29279 AC004686.1-201ENST00000605113 538 ntBASIC16.25■□□□□ 0.19
CTGFP29279 PTPN20CP-201ENST00000614090 920 ntBASIC16.25■□□□□ 0.19
CTGFP29279 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.25■□□□□ 0.19
CTGFP29279 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CTGFP29279 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ODCP-201ENST00000459650 1639 ntBASIC16.25■□□□□ 0.19
CTGFP29279 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CTGFP29279 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTGFP29279 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 AC092570.1-201ENST00000414446 469 ntBASIC16.24■□□□□ 0.19
CTGFP29279 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.24■□□□□ 0.19
CTGFP29279 STK24P1-201ENST00000455035 1291 ntBASIC16.24■□□□□ 0.19
CTGFP29279 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.24■□□□□ 0.19
CTGFP29279 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.24■□□□□ 0.19
CTGFP29279 AC145285.5-201ENST00000562217 361 ntBASIC16.24■□□□□ 0.19
CTGFP29279 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.24■□□□□ 0.19
CTGFP29279 AC018846.1-201ENST00000568231 183 ntBASIC16.24■□□□□ 0.19
CTGFP29279 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.24■□□□□ 0.19
CTGFP29279 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.24■□□□□ 0.19
CTGFP29279 AC026471.1-201ENST00000564629 3026 ntBASIC16.24■□□□□ 0.19
CTGFP29279 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CTGFP29279 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.24■□□□□ 0.19
CTGFP29279 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CTGFP29279 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTGFP29279 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms