Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
COL8A2P25067 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 AGAP7P-201ENST00000582299 2062 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 AGAP14-201ENST00000624701 2060 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.51□□□□□ -0.41
COL8A2P25067 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
COL8A2P25067 AC010141.1-201ENST00000411585 623 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.51□□□□□ -0.41
COL8A2P25067 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.51□□□□□ -0.41
COL8A2P25067 AC005077.2-201ENST00000449786 690 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 AC104073.2-201ENST00000453737 312 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 BX284668.4-201ENST00000453917 508 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.51□□□□□ -0.41
COL8A2P25067 HIST2H2BC-201ENST00000498492 580 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 ACTG1P17-201ENST00000558391 1119 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 AC009955.4-201ENST00000597192 544 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.51□□□□□ -0.41
COL8A2P25067 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.51□□□□□ -0.41
COL8A2P25067 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 AC022748.3-201ENST00000621828 275 ntBASIC12.51□□□□□ -0.41
COL8A2P25067 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.51□□□□□ -0.41
COL8A2P25067 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
COL8A2P25067 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.51□□□□□ -0.41
COL8A2P25067 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.51□□□□□ -0.41
COL8A2P25067 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
COL8A2P25067 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.51□□□□□ -0.41
COL8A2P25067 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COL8A2P25067 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 AC005840.4-201ENST00000541242 2494 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 DPM3-202ENST00000368399 517 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.5□□□□□ -0.41
COL8A2P25067 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.5□□□□□ -0.41
COL8A2P25067 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.5□□□□□ -0.41
COL8A2P25067 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
COL8A2P25067 AC005740.2-201ENST00000511085 419 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 SCARNA20.5-201ENST00000516991 142 ntBASIC12.5□□□□□ -0.41
COL8A2P25067 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COL8A2P25067 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.5□□□□□ -0.41
COL8A2P25067 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms