Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 BX640514.1-201ENST00000583223 1918 ntBASIC14.97□□□□□ -0.01
HLA-DPA1P20036 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPA1P20036 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.96□□□□□ -0.01
HLA-DPA1P20036 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 GK-202ENST00000378941 458 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 U91328.1-201ENST00000437528 223 ntBASIC14.96□□□□□ -0.01
HLA-DPA1P20036 AC234783.1-201ENST00000441761 496 ntBASIC14.96□□□□□ -0.01
HLA-DPA1P20036 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 CROCCP4-201ENST00000457096 498 ntBASIC14.96□□□□□ -0.01
HLA-DPA1P20036 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 KRT17P8-201ENST00000540749 863 ntBASIC14.96□□□□□ -0.01
HLA-DPA1P20036 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 RN7SL713P-201ENST00000582127 302 ntBASIC14.96□□□□□ -0.01
HLA-DPA1P20036 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 AP001002.3-201ENST00000623482 206 ntBASIC14.96□□□□□ -0.01
HLA-DPA1P20036 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPA1P20036 PDIA3P1-201ENST00000471856 1510 ntBASIC14.96□□□□□ -0.02
HLA-DPA1P20036 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 AC009093.2-202ENST00000620513 2079 ntBASIC14.96□□□□□ -0.02
HLA-DPA1P20036 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.96□□□□□ -0.02
HLA-DPA1P20036 AL136379.1-201ENST00000623471 2642 ntBASIC14.96□□□□□ -0.02
HLA-DPA1P20036 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AC023908.3-201ENST00000564211 3047 ntBASIC14.95□□□□□ -0.02
HLA-DPA1P20036 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AHCYP2-201ENST00000430630 1300 ntBASIC14.95□□□□□ -0.02
HLA-DPA1P20036 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms