Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ERCC3P19447 AL157791.1-201ENST00000553667 1699 ntBASIC17.16■□□□□ 0.34
ERCC3P19447 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ERCC3P19447 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
ERCC3P19447 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC3P19447 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
ERCC3P19447 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ERCC3P19447 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC3P19447 AC007274.2-201ENST00000421675 662 ntBASIC17.15■□□□□ 0.34
ERCC3P19447 MAGEA5-201ENST00000446757 942 ntBASIC17.15■□□□□ 0.34
ERCC3P19447 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.15■□□□□ 0.34
ERCC3P19447 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC3P19447 AL160314.3-201ENST00000556041 767 ntBASIC17.15■□□□□ 0.34
ERCC3P19447 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ERCC3P19447 SNORD3B-2-202ENST00000571722 791 ntBASIC17.15■□□□□ 0.34
ERCC3P19447 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC3P19447 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.15■□□□□ 0.34
ERCC3P19447 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC3P19447 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC3P19447 AC128714.1-201ENST00000637035 887 ntBASIC17.15■□□□□ 0.34
ERCC3P19447 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.15■□□□□ 0.34
ERCC3P19447 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
ERCC3P19447 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC3P19447 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 LINC00528-201ENST00000600723 2160 ntBASIC17.15■□□□□ 0.34
ERCC3P19447 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC3P19447 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ERCC3P19447 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC3P19447 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ERCC3P19447 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
ERCC3P19447 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
ERCC3P19447 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ERCC3P19447 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.14■□□□□ 0.33
ERCC3P19447 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.14■□□□□ 0.33
ERCC3P19447 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.14■□□□□ 0.33
ERCC3P19447 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 EEF1DP6-201ENST00000449232 372 ntBASIC17.14■□□□□ 0.33
ERCC3P19447 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.14■□□□□ 0.33
ERCC3P19447 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.14■□□□□ 0.33
ERCC3P19447 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ERCC3P19447 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ERCC3P19447 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC3P19447 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ERCC3P19447 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms