Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC084121.3-201ENST00000641716 218 ntBASIC17.78■□□□□ 0.44
NCLP19338 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 FP325330.2-201ENST00000624219 5630 ntBASIC17.78■□□□□ 0.44
NCLP19338 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NCLP19338 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 SLC9A3P3-201ENST00000457608 2229 ntBASIC17.78■□□□□ 0.44
NCLP19338 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCLP19338 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NCLP19338 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
NCLP19338 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NCLP19338 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NCLP19338 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.77■□□□□ 0.44
NCLP19338 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NCLP19338 MRPS18AP1-201ENST00000414458 589 ntBASIC17.77■□□□□ 0.44
NCLP19338 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NCLP19338 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NCLP19338 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 TERF1P3-201ENST00000505638 1227 ntBASIC17.77■□□□□ 0.44
NCLP19338 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.77■□□□□ 0.44
NCLP19338 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.77■□□□□ 0.44
NCLP19338 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.77■□□□□ 0.44
NCLP19338 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.77■□□□□ 0.44
NCLP19338 AC008761.3-201ENST00000624803 892 ntBASIC17.77■□□□□ 0.44
NCLP19338 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.77■□□□□ 0.44
NCLP19338 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCLP19338 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCLP19338 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NCLP19338 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCLP19338 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NCLP19338 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.77■□□□□ 0.43
NCLP19338 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCLP19338 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.77■□□□□ 0.43
NCLP19338 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCLP19338 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NCLP19338 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.77■□□□□ 0.43
NCLP19338 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
NCLP19338 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC17.76■□□□□ 0.43
NCLP19338 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NCLP19338 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 CETN4P-206ENST00000642099 2168 ntBASIC17.76■□□□□ 0.43
NCLP19338 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NCLP19338 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.76■□□□□ 0.43
NCLP19338 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 MST1P2-201ENST00000457982 2291 ntBASIC17.76■□□□□ 0.43
NCLP19338 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NCLP19338 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 AL133267.1-201ENST00000398220 340 ntBASIC17.76■□□□□ 0.43
NCLP19338 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NCLP19338 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.76■□□□□ 0.43
NCLP19338 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.76■□□□□ 0.43
NCLP19338 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.76■□□□□ 0.43
NCLP19338 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.76■□□□□ 0.43
NCLP19338 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.76■□□□□ 0.43
NCLP19338 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NCLP19338 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.76■□□□□ 0.43
NCLP19338 LINC02560-201ENST00000596379 459 ntBASIC17.76■□□□□ 0.43
NCLP19338 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCLP19338 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms