Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 KRT18P66-201ENST00000452970 1269 ntBASIC16.39■□□□□ 0.21
COL11A1P12107 RPL18AP8-201ENST00000486071 528 ntBASIC16.39■□□□□ 0.21
COL11A1P12107 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.39■□□□□ 0.21
COL11A1P12107 NDUFB10P1-201ENST00000567319 521 ntBASIC16.39■□□□□ 0.21
COL11A1P12107 AL021707.6-201ENST00000609212 491 ntBASIC16.39■□□□□ 0.21
COL11A1P12107 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.39■□□□□ 0.21
COL11A1P12107 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.39■□□□□ 0.21
COL11A1P12107 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.39■□□□□ 0.21
COL11A1P12107 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
COL11A1P12107 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL11A1P12107 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.38■□□□□ 0.21
COL11A1P12107 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COL11A1P12107 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 AC108734.2-201ENST00000420887 1069 ntBASIC16.38■□□□□ 0.21
COL11A1P12107 RN7SL564P-201ENST00000496309 250 ntBASIC16.38■□□□□ 0.21
COL11A1P12107 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.38■□□□□ 0.21
COL11A1P12107 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.38■□□□□ 0.21
COL11A1P12107 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
COL11A1P12107 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.38■□□□□ 0.21
COL11A1P12107 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.38■□□□□ 0.21
COL11A1P12107 MIR6756-201ENST00000616240 63 ntBASIC16.38■□□□□ 0.21
COL11A1P12107 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.38■□□□□ 0.21
COL11A1P12107 AC090505.1-201ENST00000430515 1834 ntBASIC16.38■□□□□ 0.21
COL11A1P12107 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COL11A1P12107 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.38■□□□□ 0.21
COL11A1P12107 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.38■□□□□ 0.21
COL11A1P12107 RPL3P2-204ENST00000413027 1203 ntBASIC16.38■□□□□ 0.21
COL11A1P12107 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.38■□□□□ 0.21
COL11A1P12107 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.38■□□□□ 0.21
COL11A1P12107 TRMT112P3-201ENST00000580149 358 ntBASIC16.38■□□□□ 0.21
COL11A1P12107 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
COL11A1P12107 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL11A1P12107 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
COL11A1P12107 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.37■□□□□ 0.21
COL11A1P12107 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
COL11A1P12107 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 LINC00265-2P-201ENST00000413372 782 ntBASIC16.37■□□□□ 0.21
COL11A1P12107 AC098934.1-203ENST00000442868 1262 ntBASIC16.37■□□□□ 0.21
COL11A1P12107 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
COL11A1P12107 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.37■□□□□ 0.21
COL11A1P12107 RN7SL455P-201ENST00000580629 282 ntBASIC16.37■□□□□ 0.21
COL11A1P12107 RN7SL470P-201ENST00000583069 259 ntBASIC16.37■□□□□ 0.21
COL11A1P12107 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.37■□□□□ 0.21
COL11A1P12107 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.37■□□□□ 0.21
COL11A1P12107 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.37■□□□□ 0.21
COL11A1P12107 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.37■□□□□ 0.21
COL11A1P12107 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 AC006372.4-201ENST00000624122 1543 ntBASIC16.37■□□□□ 0.21
COL11A1P12107 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL11A1P12107 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
COL11A1P12107 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.36■□□□□ 0.21
COL11A1P12107 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
COL11A1P12107 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
COL11A1P12107 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.36■□□□□ 0.21
COL11A1P12107 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
COL11A1P12107 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms