Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 REEP5-205ENST00000504247 480 ntTSL 5 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 ALG1L6P-201ENST00000515248 758 ntBASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 AC138701.2-201ENST00000553634 226 ntBASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 AC011270.2-201ENST00000624293 2550 ntBASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 AC126365.1-201ENST00000578585 1514 ntBASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CSB-PGBD3P0DP91 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 AC092135.3-201ENST00000624151 1846 ntBASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 BAK1P1-201ENST00000317045 636 ntBASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 AP000911.2-201ENST00000534330 502 ntBASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 MIR5196-201ENST00000578146 115 ntBASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSB-PGBD3P0DP91 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CSB-PGBD3P0DP91 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CSB-PGBD3P0DP91 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.39■□□□□ 0.7
CSB-PGBD3P0DP91 LINC01101-201ENST00000622953 1884 ntBASIC19.39■□□□□ 0.7
CSB-PGBD3P0DP91 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSB-PGBD3P0DP91 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSB-PGBD3P0DP91 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSB-PGBD3P0DP91 AC026691.1-201ENST00000602502 2017 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 SSR4P1-203ENST00000599569 2260 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC010234.1-201ENST00000494599 870 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 HERC2P11-201ENST00000562845 725 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 C2orf69P1-201ENST00000563532 1093 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC124068.2-201ENST00000569473 1109 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC100756.2-201ENST00000569537 736 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AC005041.3-201ENST00000606287 649 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 AP000322.3-201ENST00000608665 388 ntBASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSB-PGBD3P0DP91 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms