Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.94□□□□□ -0.18
CTSBP07858 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSBP07858 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.94□□□□□ -0.18
CTSBP07858 AL035414.1-201ENST00000451327 857 ntBASIC13.94□□□□□ -0.18
CTSBP07858 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSBP07858 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CTSBP07858 CHMP4BP1-201ENST00000556017 588 ntBASIC13.94□□□□□ -0.18
CTSBP07858 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSBP07858 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.94□□□□□ -0.18
CTSBP07858 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.94□□□□□ -0.18
CTSBP07858 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSBP07858 AC009884.2-201ENST00000603110 324 ntBASIC13.94□□□□□ -0.18
CTSBP07858 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.94□□□□□ -0.18
CTSBP07858 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.94□□□□□ -0.18
CTSBP07858 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CTSBP07858 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.94□□□□□ -0.18
CTSBP07858 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CTSBP07858 AC008132.1-202ENST00000342005 1389 ntBASIC13.94□□□□□ -0.18
CTSBP07858 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.94□□□□□ -0.18
CTSBP07858 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.94□□□□□ -0.18
CTSBP07858 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CTSBP07858 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CTSBP07858 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CTSBP07858 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CTSBP07858 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.93□□□□□ -0.18
CTSBP07858 FAM58BP-201ENST00000439056 645 ntBASIC13.93□□□□□ -0.18
CTSBP07858 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 RN7SL11P-201ENST00000471305 293 ntBASIC13.93□□□□□ -0.18
CTSBP07858 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSBP07858 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSBP07858 AC125604.1-201ENST00000496255 707 ntBASIC13.93□□□□□ -0.18
CTSBP07858 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSBP07858 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.93□□□□□ -0.18
CTSBP07858 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.93□□□□□ -0.18
CTSBP07858 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 AC140479.7-201ENST00000636301 2332 ntBASIC13.93□□□□□ -0.18
CTSBP07858 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 LINC00552-201ENST00000625151 2579 ntBASIC13.93□□□□□ -0.18
CTSBP07858 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.93□□□□□ -0.18
CTSBP07858 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CTSBP07858 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSBP07858 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms