Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.27□□□□□ -0.28
APOA1P02647 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.27□□□□□ -0.28
APOA1P02647 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.27□□□□□ -0.28
APOA1P02647 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.27□□□□□ -0.28
APOA1P02647 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
APOA1P02647 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
APOA1P02647 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.27□□□□□ -0.28
APOA1P02647 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 AC106818.1-201ENST00000623223 3242 ntBASIC13.27□□□□□ -0.28
APOA1P02647 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
APOA1P02647 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOA1P02647 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 AC104457.1-201ENST00000401024 814 ntBASIC13.27□□□□□ -0.29
APOA1P02647 HNRNPDP1-201ENST00000439535 754 ntBASIC13.27□□□□□ -0.29
APOA1P02647 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.27□□□□□ -0.29
APOA1P02647 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.27□□□□□ -0.29
APOA1P02647 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.27□□□□□ -0.29
APOA1P02647 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.27□□□□□ -0.29
APOA1P02647 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.27□□□□□ -0.29
APOA1P02647 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
APOA1P02647 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.27□□□□□ -0.29
APOA1P02647 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
APOA1P02647 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOA1P02647 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.27□□□□□ -0.29
APOA1P02647 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
APOA1P02647 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC13.26□□□□□ -0.29
APOA1P02647 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC13.26□□□□□ -0.29
APOA1P02647 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
APOA1P02647 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
APOA1P02647 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.26□□□□□ -0.29
APOA1P02647 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
APOA1P02647 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.26□□□□□ -0.29
APOA1P02647 AC018712.1-201ENST00000455767 687 ntBASIC13.26□□□□□ -0.29
APOA1P02647 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.26□□□□□ -0.29
APOA1P02647 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.26□□□□□ -0.29
APOA1P02647 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.26□□□□□ -0.29
APOA1P02647 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.26□□□□□ -0.29
APOA1P02647 UNC93B6-202ENST00000528242 690 ntBASIC13.26□□□□□ -0.29
APOA1P02647 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.26□□□□□ -0.29
APOA1P02647 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
APOA1P02647 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
APOA1P02647 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.26□□□□□ -0.29
APOA1P02647 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 AC090114.2-201ENST00000608477 7054 ntBASIC13.26□□□□□ -0.29
APOA1P02647 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.26□□□□□ -0.29
APOA1P02647 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.26□□□□□ -0.29
APOA1P02647 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.26□□□□□ -0.29
APOA1P02647 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
APOA1P02647 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOA1P02647 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms