Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 NME6-208ENST00000435684 599 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1AO95602 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1AO95602 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.92■□□□□ 0.94
POLR1AO95602 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1AO95602 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1AO95602 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC20.92■□□□□ 0.94
POLR1AO95602 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1AO95602 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1AO95602 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
POLR1AO95602 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 KHSRPP1-201ENST00000427983 1768 ntBASIC20.92■□□□□ 0.94
POLR1AO95602 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 AL109809.1-201ENST00000418979 1367 ntBASIC20.92■□□□□ 0.94
POLR1AO95602 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
POLR1AO95602 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
POLR1AO95602 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.92■□□□□ 0.94
POLR1AO95602 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1AO95602 AL929302.1-201ENST00000426556 871 ntBASIC20.92■□□□□ 0.94
POLR1AO95602 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1AO95602 AC131206.1-201ENST00000538078 1211 ntBASIC20.92■□□□□ 0.94
POLR1AO95602 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1AO95602 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1AO95602 SIGLEC22P-201ENST00000599104 714 ntBASIC20.92■□□□□ 0.94
POLR1AO95602 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1AO95602 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
POLR1AO95602 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1AO95602 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1AO95602 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1AO95602 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1AO95602 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
POLR1AO95602 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1AO95602 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1AO95602 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1AO95602 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
POLR1AO95602 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1AO95602 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
POLR1AO95602 MIR1301-201ENST00000408518 82 ntBASIC20.91■□□□□ 0.94
POLR1AO95602 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 RN7SL277P-201ENST00000481521 288 ntBASIC20.91■□□□□ 0.94
POLR1AO95602 RN7SL23P-201ENST00000484055 275 ntBASIC20.91■□□□□ 0.94
POLR1AO95602 ALG1L3P-201ENST00000503331 765 ntBASIC20.91■□□□□ 0.94
POLR1AO95602 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC20.91■□□□□ 0.94
POLR1AO95602 KRT8P1-201ENST00000557533 1207 ntBASIC20.91■□□□□ 0.94
POLR1AO95602 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.91■□□□□ 0.94
POLR1AO95602 AC090510.3-201ENST00000615831 821 ntBASIC20.91■□□□□ 0.94
POLR1AO95602 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1AO95602 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1AO95602 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1AO95602 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
POLR1AO95602 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 MIR566-201ENST00000385187 94 ntBASIC20.9■□□□□ 0.94
POLR1AO95602 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1AO95602 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR1AO95602 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR1AO95602 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1AO95602 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.9■□□□□ 0.94
POLR1AO95602 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
POLR1AO95602 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR1AO95602 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
POLR1AO95602 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms