Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX2-2O95096 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-2O95096 SNX29P1-201ENST00000548357 1007 ntBASIC13.63□□□□□ -0.23
NKX2-2O95096 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-2O95096 AP006547.1-201ENST00000563435 692 ntBASIC13.63□□□□□ -0.23
NKX2-2O95096 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-2O95096 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-2O95096 AL136301.1-201ENST00000615830 422 ntBASIC13.63□□□□□ -0.23
NKX2-2O95096 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-2O95096 SHC1P1-201ENST00000425230 1745 ntBASIC13.63□□□□□ -0.23
NKX2-2O95096 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
NKX2-2O95096 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-2O95096 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-2O95096 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NKX2-2O95096 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-2O95096 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-2O95096 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-2O95096 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-2O95096 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-2O95096 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NKX2-2O95096 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NKX2-2O95096 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX2-2O95096 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 AC027237.1-201ENST00000560942 655 ntBASIC13.62□□□□□ -0.23
NKX2-2O95096 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NKX2-2O95096 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX2-2O95096 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX2-2O95096 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX2-2O95096 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX2-2O95096 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.62□□□□□ -0.23
NKX2-2O95096 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-2O95096 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 GRK6P1-201ENST00000400595 1711 ntBASIC13.61□□□□□ -0.23
NKX2-2O95096 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
NKX2-2O95096 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 AC011498.7-201ENST00000624986 2027 ntBASIC13.61□□□□□ -0.23
NKX2-2O95096 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 GPR53P-205ENST00000457298 1084 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms