Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 AL157414.3-201ENST00000624276 1954 ntBASIC12.89□□□□□ -0.35
UPK1BO75841 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 AL133267.1-201ENST00000398220 340 ntBASIC12.89□□□□□ -0.35
UPK1BO75841 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.89□□□□□ -0.35
UPK1BO75841 FGFR3P6-201ENST00000457012 610 ntBASIC12.89□□□□□ -0.35
UPK1BO75841 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 SAMD11P1-201ENST00000571429 661 ntBASIC12.89□□□□□ -0.35
UPK1BO75841 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 AC026979.3-201ENST00000607315 403 ntBASIC12.89□□□□□ -0.35
UPK1BO75841 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.89□□□□□ -0.35
UPK1BO75841 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UPK1BO75841 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
UPK1BO75841 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 AC022497.1-201ENST00000624916 3691 ntBASIC12.88□□□□□ -0.35
UPK1BO75841 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK1BO75841 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.88□□□□□ -0.35
UPK1BO75841 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 AC108073.2-201ENST00000464002 357 ntBASIC12.88□□□□□ -0.35
UPK1BO75841 AC105233.2-201ENST00000523697 349 ntBASIC12.88□□□□□ -0.35
UPK1BO75841 AF228730.5-201ENST00000530288 346 ntBASIC12.88□□□□□ -0.35
UPK1BO75841 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.88□□□□□ -0.35
UPK1BO75841 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK1BO75841 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UPK1BO75841 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK1BO75841 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK1BO75841 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms