Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC004466.1-201ENST00000599515 1080 ntBASIC14.3□□□□□ -0.12
SLC28A1O00337 CHCHD2P3-201ENST00000603038 451 ntBASIC14.3□□□□□ -0.12
SLC28A1O00337 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A1O00337 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.3□□□□□ -0.12
SLC28A1O00337 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A1O00337 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLC28A1O00337 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SLC28A1O00337 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC28A1O00337 PMS2P2-201ENST00000425039 1128 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC022137.2-201ENST00000503482 481 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 GCOM2-201ENST00000509133 1104 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC009486.1-201ENST00000569860 813 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC006538.3-201ENST00000612495 578 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 CU634019.7-201ENST00000624153 1185 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 FP236241.2-201ENST00000624906 1185 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SLC28A1O00337 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC087386.2-201ENST00000623212 4637 ntBASIC14.29□□□□□ -0.12
SLC28A1O00337 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC28A1O00337 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SLC28A1O00337 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A1O00337 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A1O00337 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A1O00337 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
SLC28A1O00337 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC28A1O00337 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A1O00337 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SLC28A1O00337 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A1O00337 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A1O00337 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms