Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 SNHG9-202ENST00000564014 471 ntBASIC16.18■□□□□ 0.18
CCDC66A2RUB6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 AC079781.4-201ENST00000641908 219 ntBASIC16.18■□□□□ 0.18
CCDC66A2RUB6 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 AC015818.8-201ENST00000587907 1519 ntBASIC16.18■□□□□ 0.18
CCDC66A2RUB6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 AC254562.1-201ENST00000417586 456 ntBASIC16.17■□□□□ 0.18
CCDC66A2RUB6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 HLA-V-204ENST00000476601 1289 ntBASIC16.17■□□□□ 0.18
CCDC66A2RUB6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 AF228730.6-201ENST00000641497 218 ntBASIC16.17■□□□□ 0.18
CCDC66A2RUB6 AC084121.3-201ENST00000641716 218 ntBASIC16.17■□□□□ 0.18
CCDC66A2RUB6 AL121723.1-201ENST00000445194 1519 ntBASIC16.17■□□□□ 0.18
CCDC66A2RUB6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC66A2RUB6 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 AC004945.1-201ENST00000416738 983 ntBASIC16.16■□□□□ 0.18
CCDC66A2RUB6 AP006288.1-201ENST00000446065 395 ntBASIC16.16■□□□□ 0.18
CCDC66A2RUB6 DNAJB3-202ENST00000449667 1266 ntBASIC16.16■□□□□ 0.18
CCDC66A2RUB6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 AC069262.1-201ENST00000539058 672 ntBASIC16.16■□□□□ 0.18
CCDC66A2RUB6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 AC074044.1-201ENST00000609673 707 ntBASIC16.16■□□□□ 0.18
CCDC66A2RUB6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms