Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AC007881.3-201ENST00000608897 607 ntBASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 MIR6842-201ENST00000612539 65 ntBASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AC092299.1-201ENST00000632679 757 ntBASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AC126755.1-201ENST00000525846 6405 ntBASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 LINC01165-201ENST00000445190 1623 ntBASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AC087481.3-201ENST00000602886 1894 ntBASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AHCYP4-201ENST00000419201 1315 ntBASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 DUTP3-201ENST00000450025 415 ntBASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AC087392.5-201ENST00000612517 489 ntBASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AC007292.2-201ENST00000593524 1812 ntBASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC187A0A096LP49 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 NORAD-201ENST00000565493 5339 ntBASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC187A0A096LP49 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms