Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SIGLEC30P-201ENST00000455569 941 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SLC25A1P4-201ENST00000567977 778 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AC097493.4-201ENST00000641197 219 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AL590552.1-201ENST00000623164 1770 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ABCD1P2-201ENST00000429313 1601 ntBASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LINC01558Q9Y6Z2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 NBPF17P-201ENST00000401087 2119 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PI4KAP1-204ENST00000612579 1703 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AL845472.1-202ENST00000624675 4080 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AL713866.1-201ENST00000563320 3125 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AL031432.4-201ENST00000641729 2190 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PMS2P1-201ENST00000431037 1228 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 KRT18P48-201ENST00000434763 852 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PBX2P1-201ENST00000493219 1291 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms