Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 TOMM22P5-201ENST00000416399 439 ntBASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AC136604.1-201ENST00000418535 575 ntBASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 SLED1-202ENST00000512051 380 ntBASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 AC133539.2-201ENST00000604757 467 ntBASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX49Q9Y6V7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AC089987.1-201ENST00000551654 2209 ntBASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AL442647.2-201ENST00000429864 857 ntBASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 CTBP2P5-201ENST00000454986 1264 ntBASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AC233724.13-201ENST00000598383 410 ntBASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AL049840.4-201ENST00000602422 811 ntBASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX49Q9Y6V7 AL359881.3-201ENST00000602640 1721 ntBASIC17.89■□□□□ 0.46
DDX49Q9Y6V7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
DDX49Q9Y6V7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
DDX49Q9Y6V7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
DDX49Q9Y6V7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms