Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 NAV1-210ENST00000593583 726 ntBASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 AC004686.1-201ENST00000605113 538 ntBASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 LINC00244-201ENST00000625073 613 ntBASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCH2Q9Y6C5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 AL136172.1-201ENST00000598590 1394 ntBASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCH2Q9Y6C5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 NHP2P1-201ENST00000335274 462 ntBASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 AC092580.1-201ENST00000433998 658 ntBASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCH2Q9Y6C5 RN7SL665P-201ENST00000578793 300 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms