Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AL354989.2-201ENST00000435838 1540 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AC013726.1-201ENST00000563747 2285 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AC139749.1-202ENST00000617529 3139 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AC026954.1-201ENST00000429771 1293 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AP000812.2-201ENST00000538934 718 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 RN7SL48P-201ENST00000579283 293 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 RHOXF1P1-202ENST00000635473 501 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 LINC00528-201ENST00000600723 2160 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPH3AQ9Y2J0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 MIR1202-201ENST00000408529 83 ntBASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 AC099336.1-201ENST00000417053 1171 ntBASIC13.69□□□□□ -0.22
RPH3AQ9Y2J0 CNN2P8-201ENST00000421872 913 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms